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I've read and heard a number of studies/discussions on gut health and the biome. What seems to be the most prevalent finding is that a variety of fibrous items in the diet help to create a variety of microbes in the gut and function as prebiotics (food for the microbes). However none of them referenced muscle growth, just general wound recovery and physical health. Perlmutter talks about gut health and brain activity, Rich Roll has a few podcasts on the gut biome and fibre and there is a general surgeon from Seattle who did a talk on the gut biome and stool transfer. I will post when I find it.